Package org.forester.protein
Class BasicDomain
- java.lang.Object
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- org.forester.protein.BasicDomain
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Constructor Summary
Constructors Constructor Description BasicDomain(java.lang.String id)
BasicDomain(java.lang.String id, int from, int to, short number, short total_count, double per_domain_evalue, double per_domain_score)
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description int
compareTo(Domain domain)
Basic domains are compared/sorted based upon their identifiers (case insensitive) and their numbers.boolean
equals(java.lang.Object o)
Basic domains are considered equal if they have the same identifier (case sensitive).java.lang.String
getDomainId()
int
getFrom()
int
getLength()
short
getNumber()
double
getPerDomainEvalue()
double
getPerDomainScore()
int
getTo()
short
getTotalCount()
int
hashCode()
static short
obtainIdAsShort(java.lang.String id)
static java.lang.String
obtainIdFromShort(short id)
java.lang.String
toString()
java.lang.StringBuffer
toStringBuffer()
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Method Detail
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compareTo
public int compareTo(Domain domain)
Basic domains are compared/sorted based upon their identifiers (case insensitive) and their numbers.- Specified by:
compareTo
in interfacejava.lang.Comparable<Domain>
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equals
public boolean equals(java.lang.Object o)
Basic domains are considered equal if they have the same identifier (case sensitive).- Overrides:
equals
in classjava.lang.Object
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getDomainId
public java.lang.String getDomainId()
- Specified by:
getDomainId
in interfaceDomain
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getPerDomainEvalue
public double getPerDomainEvalue()
- Specified by:
getPerDomainEvalue
in interfaceDomain
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getPerDomainScore
public double getPerDomainScore()
- Specified by:
getPerDomainScore
in interfaceDomain
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getTotalCount
public short getTotalCount()
- Specified by:
getTotalCount
in interfaceDomain
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hashCode
public int hashCode()
- Overrides:
hashCode
in classjava.lang.Object
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toString
public java.lang.String toString()
- Overrides:
toString
in classjava.lang.Object
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toStringBuffer
public java.lang.StringBuffer toStringBuffer()
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obtainIdAsShort
public static final short obtainIdAsShort(java.lang.String id)
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obtainIdFromShort
public static final java.lang.String obtainIdFromShort(short id)
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