Class AtomSites
- java.lang.Object
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- org.biojava.nbio.structure.io.mmcif.model.AbstractBean
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- org.biojava.nbio.structure.io.mmcif.model.AtomSites
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public class AtomSites extends AbstractBean
A class containing the _atom_sites data. Equivalent to the SCALE records in PDB files.- Author:
- Jose Duarte
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Constructor Summary
Constructors Constructor Description AtomSites()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description java.lang.String
getCartn_transf_matrix11()
java.lang.String
getCartn_transf_matrix12()
java.lang.String
getCartn_transf_matrix13()
java.lang.String
getCartn_transf_matrix21()
java.lang.String
getCartn_transf_matrix22()
java.lang.String
getCartn_transf_matrix23()
java.lang.String
getCartn_transf_matrix31()
java.lang.String
getCartn_transf_matrix32()
java.lang.String
getCartn_transf_matrix33()
java.lang.String
getCartn_transf_vector1()
java.lang.String
getCartn_transf_vector2()
java.lang.String
getCartn_transf_vector3()
java.lang.String
getCartn_transform_axes()
java.lang.String
getEntry_id()
java.lang.String
getFract_transf_matrix11()
java.lang.String
getFract_transf_matrix12()
java.lang.String
getFract_transf_matrix13()
java.lang.String
getFract_transf_matrix21()
java.lang.String
getFract_transf_matrix22()
java.lang.String
getFract_transf_matrix23()
java.lang.String
getFract_transf_matrix31()
java.lang.String
getFract_transf_matrix32()
java.lang.String
getFract_transf_matrix33()
java.lang.String
getFract_transf_vector1()
java.lang.String
getFract_transf_vector2()
java.lang.String
getFract_transf_vector3()
void
setCartn_transf_matrix11(java.lang.String cartn_transf_matrix11)
void
setCartn_transf_matrix12(java.lang.String cartn_transf_matrix12)
void
setCartn_transf_matrix13(java.lang.String cartn_transf_matrix13)
void
setCartn_transf_matrix21(java.lang.String cartn_transf_matrix21)
void
setCartn_transf_matrix22(java.lang.String cartn_transf_matrix22)
void
setCartn_transf_matrix23(java.lang.String cartn_transf_matrix23)
void
setCartn_transf_matrix31(java.lang.String cartn_transf_matrix31)
void
setCartn_transf_matrix32(java.lang.String cartn_transf_matrix32)
void
setCartn_transf_matrix33(java.lang.String cartn_transf_matrix33)
void
setCartn_transf_vector1(java.lang.String cartn_transf_vector1)
void
setCartn_transf_vector2(java.lang.String cartn_transf_vector2)
void
setCartn_transf_vector3(java.lang.String cartn_transf_vector3)
void
setCartn_transform_axes(java.lang.String cartn_transform_axes)
void
setEntry_id(java.lang.String entry_id)
void
setFract_transf_matrix11(java.lang.String fract_transf_matrix11)
void
setFract_transf_matrix12(java.lang.String fract_transf_matrix12)
void
setFract_transf_matrix13(java.lang.String fract_transf_matrix13)
void
setFract_transf_matrix21(java.lang.String fract_transf_matrix21)
void
setFract_transf_matrix22(java.lang.String fract_transf_matrix22)
void
setFract_transf_matrix23(java.lang.String fract_transf_matrix23)
void
setFract_transf_matrix31(java.lang.String fract_transf_matrix31)
void
setFract_transf_matrix32(java.lang.String fract_transf_matrix32)
void
setFract_transf_matrix33(java.lang.String fract_transf_matrix33)
void
setFract_transf_vector1(java.lang.String fract_transf_vector1)
void
setFract_transf_vector2(java.lang.String fract_transf_vector2)
void
setFract_transf_vector3(java.lang.String fract_transf_vector3)
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Methods inherited from class org.biojava.nbio.structure.io.mmcif.model.AbstractBean
toString
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Method Detail
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getEntry_id
public java.lang.String getEntry_id()
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setEntry_id
public void setEntry_id(java.lang.String entry_id)
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getCartn_transform_axes
public java.lang.String getCartn_transform_axes()
- Returns:
- the cartn_transform_axes
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setCartn_transform_axes
public void setCartn_transform_axes(java.lang.String cartn_transform_axes)
- Parameters:
cartn_transform_axes
- the cartn_transform_axes to set
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getFract_transf_matrix11
public java.lang.String getFract_transf_matrix11()
- Returns:
- the fract_transf_matrix11
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setFract_transf_matrix11
public void setFract_transf_matrix11(java.lang.String fract_transf_matrix11)
- Parameters:
fract_transf_matrix11
- the fract_transf_matrix11 to set
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getFract_transf_matrix12
public java.lang.String getFract_transf_matrix12()
- Returns:
- the fract_transf_matrix12
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setFract_transf_matrix12
public void setFract_transf_matrix12(java.lang.String fract_transf_matrix12)
- Parameters:
fract_transf_matrix12
- the fract_transf_matrix12 to set
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getFract_transf_matrix13
public java.lang.String getFract_transf_matrix13()
- Returns:
- the fract_transf_matrix13
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setFract_transf_matrix13
public void setFract_transf_matrix13(java.lang.String fract_transf_matrix13)
- Parameters:
fract_transf_matrix13
- the fract_transf_matrix13 to set
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getFract_transf_matrix21
public java.lang.String getFract_transf_matrix21()
- Returns:
- the fract_transf_matrix21
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setFract_transf_matrix21
public void setFract_transf_matrix21(java.lang.String fract_transf_matrix21)
- Parameters:
fract_transf_matrix21
- the fract_transf_matrix21 to set
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getFract_transf_matrix22
public java.lang.String getFract_transf_matrix22()
- Returns:
- the fract_transf_matrix22
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setFract_transf_matrix22
public void setFract_transf_matrix22(java.lang.String fract_transf_matrix22)
- Parameters:
fract_transf_matrix22
- the fract_transf_matrix22 to set
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getFract_transf_matrix23
public java.lang.String getFract_transf_matrix23()
- Returns:
- the fract_transf_matrix23
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setFract_transf_matrix23
public void setFract_transf_matrix23(java.lang.String fract_transf_matrix23)
- Parameters:
fract_transf_matrix23
- the fract_transf_matrix23 to set
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getFract_transf_matrix31
public java.lang.String getFract_transf_matrix31()
- Returns:
- the fract_transf_matrix31
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setFract_transf_matrix31
public void setFract_transf_matrix31(java.lang.String fract_transf_matrix31)
- Parameters:
fract_transf_matrix31
- the fract_transf_matrix31 to set
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getFract_transf_matrix32
public java.lang.String getFract_transf_matrix32()
- Returns:
- the fract_transf_matrix32
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setFract_transf_matrix32
public void setFract_transf_matrix32(java.lang.String fract_transf_matrix32)
- Parameters:
fract_transf_matrix32
- the fract_transf_matrix32 to set
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getFract_transf_matrix33
public java.lang.String getFract_transf_matrix33()
- Returns:
- the fract_transf_matrix33
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setFract_transf_matrix33
public void setFract_transf_matrix33(java.lang.String fract_transf_matrix33)
- Parameters:
fract_transf_matrix33
- the fract_transf_matrix33 to set
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getFract_transf_vector1
public java.lang.String getFract_transf_vector1()
- Returns:
- the fract_transf_vector1
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setFract_transf_vector1
public void setFract_transf_vector1(java.lang.String fract_transf_vector1)
- Parameters:
fract_transf_vector1
- the fract_transf_vector1 to set
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getFract_transf_vector2
public java.lang.String getFract_transf_vector2()
- Returns:
- the fract_transf_vector2
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setFract_transf_vector2
public void setFract_transf_vector2(java.lang.String fract_transf_vector2)
- Parameters:
fract_transf_vector2
- the fract_transf_vector2 to set
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getFract_transf_vector3
public java.lang.String getFract_transf_vector3()
- Returns:
- the fract_transf_vector3
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setFract_transf_vector3
public void setFract_transf_vector3(java.lang.String fract_transf_vector3)
- Parameters:
fract_transf_vector3
- the fract_transf_vector3 to set
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getCartn_transf_matrix11
public java.lang.String getCartn_transf_matrix11()
- Returns:
- the cartn_transf_matrix11
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setCartn_transf_matrix11
public void setCartn_transf_matrix11(java.lang.String cartn_transf_matrix11)
- Parameters:
cartn_transf_matrix11
- the cartn_transf_matrix11 to set
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getCartn_transf_matrix12
public java.lang.String getCartn_transf_matrix12()
- Returns:
- the cartn_transf_matrix12
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setCartn_transf_matrix12
public void setCartn_transf_matrix12(java.lang.String cartn_transf_matrix12)
- Parameters:
cartn_transf_matrix12
- the cartn_transf_matrix12 to set
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getCartn_transf_matrix13
public java.lang.String getCartn_transf_matrix13()
- Returns:
- the cartn_transf_matrix13
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setCartn_transf_matrix13
public void setCartn_transf_matrix13(java.lang.String cartn_transf_matrix13)
- Parameters:
cartn_transf_matrix13
- the cartn_transf_matrix13 to set
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getCartn_transf_matrix21
public java.lang.String getCartn_transf_matrix21()
- Returns:
- the cartn_transf_matrix21
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setCartn_transf_matrix21
public void setCartn_transf_matrix21(java.lang.String cartn_transf_matrix21)
- Parameters:
cartn_transf_matrix21
- the cartn_transf_matrix21 to set
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getCartn_transf_matrix22
public java.lang.String getCartn_transf_matrix22()
- Returns:
- the cartn_transf_matrix22
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setCartn_transf_matrix22
public void setCartn_transf_matrix22(java.lang.String cartn_transf_matrix22)
- Parameters:
cartn_transf_matrix22
- the cartn_transf_matrix22 to set
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getCartn_transf_matrix23
public java.lang.String getCartn_transf_matrix23()
- Returns:
- the cartn_transf_matrix23
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setCartn_transf_matrix23
public void setCartn_transf_matrix23(java.lang.String cartn_transf_matrix23)
- Parameters:
cartn_transf_matrix23
- the cartn_transf_matrix23 to set
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getCartn_transf_matrix31
public java.lang.String getCartn_transf_matrix31()
- Returns:
- the cartn_transf_matrix31
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setCartn_transf_matrix31
public void setCartn_transf_matrix31(java.lang.String cartn_transf_matrix31)
- Parameters:
cartn_transf_matrix31
- the cartn_transf_matrix31 to set
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getCartn_transf_matrix32
public java.lang.String getCartn_transf_matrix32()
- Returns:
- the cartn_transf_matrix32
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setCartn_transf_matrix32
public void setCartn_transf_matrix32(java.lang.String cartn_transf_matrix32)
- Parameters:
cartn_transf_matrix32
- the cartn_transf_matrix32 to set
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getCartn_transf_matrix33
public java.lang.String getCartn_transf_matrix33()
- Returns:
- the cartn_transf_matrix33
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setCartn_transf_matrix33
public void setCartn_transf_matrix33(java.lang.String cartn_transf_matrix33)
- Parameters:
cartn_transf_matrix33
- the cartn_transf_matrix33 to set
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getCartn_transf_vector1
public java.lang.String getCartn_transf_vector1()
- Returns:
- the cartn_transf_vector1
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setCartn_transf_vector1
public void setCartn_transf_vector1(java.lang.String cartn_transf_vector1)
- Parameters:
cartn_transf_vector1
- the cartn_transf_vector1 to set
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getCartn_transf_vector2
public java.lang.String getCartn_transf_vector2()
- Returns:
- the cartn_transf_vector2
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setCartn_transf_vector2
public void setCartn_transf_vector2(java.lang.String cartn_transf_vector2)
- Parameters:
cartn_transf_vector2
- the cartn_transf_vector2 to set
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getCartn_transf_vector3
public java.lang.String getCartn_transf_vector3()
- Returns:
- the cartn_transf_vector3
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setCartn_transf_vector3
public void setCartn_transf_vector3(java.lang.String cartn_transf_vector3)
- Parameters:
cartn_transf_vector3
- the cartn_transf_vector3 to set
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