Class ChemCompAtom
- java.lang.Object
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- org.biojava.nbio.structure.io.mmcif.model.ChemCompAtom
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- All Implemented Interfaces:
java.io.Serializable
public class ChemCompAtom extends java.lang.Object implements java.io.Serializable
stores these fields: _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal- Author:
- Andreas Prlic
- See Also:
- Serialized Form
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Constructor Summary
Constructors Constructor Description ChemCompAtom()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description java.lang.String
getAlt_atom_id()
java.lang.String
getAtom_id()
java.lang.String
getCharge()
java.lang.String
getComp_id()
java.lang.String
getModel_Cartn_x()
java.lang.String
getModel_Cartn_y()
java.lang.String
getModel_Cartn_z()
java.lang.String
getPdbx_align()
java.lang.String
getPdbx_aromatic_flag()
java.lang.String
getPdbx_component_atom_id()
java.lang.String
getPdbx_component_comp_id()
java.lang.String
getPdbx_component_id()
java.lang.String
getPdbx_leaving_atom_flag()
java.lang.String
getPdbx_model_Cartn_x_ideal()
java.lang.String
getPdbx_model_Cartn_y_ideal()
java.lang.String
getPdbx_model_Cartn_z_ideal()
java.lang.String
getPdbx_ordinal()
java.lang.String
getPdbx_polymer_type()
java.lang.String
getPdbx_ref_id()
java.lang.String
getPdbx_residue_numbering()
java.lang.String
getPdbx_stereo_config()
java.lang.String
getType_symbol()
void
setAlt_atom_id(java.lang.String alt_atom_id)
void
setAtom_id(java.lang.String atom_id)
void
setCharge(java.lang.String charge)
void
setComp_id(java.lang.String comp_id)
void
setModel_Cartn_x(java.lang.String model_Cartn_x)
void
setModel_Cartn_y(java.lang.String model_Cartn_y)
void
setModel_Cartn_z(java.lang.String model_Cartn_z)
void
setPdbx_align(java.lang.String pdbx_align)
void
setPdbx_aromatic_flag(java.lang.String pdbx_aromatic_flag)
void
setPdbx_component_atom_id(java.lang.String pdbx_component_atom_id)
void
setPdbx_component_comp_id(java.lang.String pdbx_component_comp_id)
void
setPdbx_component_id(java.lang.String pdbx_component_id)
void
setPdbx_leaving_atom_flag(java.lang.String pdbx_leaving_atom_flag)
void
setPdbx_model_Cartn_x_ideal(java.lang.String pdbx_model_Cartn_x_ideal)
void
setPdbx_model_Cartn_y_ideal(java.lang.String pdbx_model_Cartn_y_ideal)
void
setPdbx_model_Cartn_z_ideal(java.lang.String pdbx_model_Cartn_z_ideal)
void
setPdbx_ordinal(java.lang.String pdbx_ordinal)
void
setPdbx_polymer_type(java.lang.String pdbx_polymer_type)
void
setPdbx_ref_id(java.lang.String pdbx_ref_id)
void
setPdbx_residue_numbering(java.lang.String pdbx_residue_numbering)
void
setPdbx_stereo_config(java.lang.String pdbx_stereo_config)
void
setType_symbol(java.lang.String type_symbol)
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Method Detail
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getComp_id
public java.lang.String getComp_id()
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setComp_id
public void setComp_id(java.lang.String comp_id)
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getAtom_id
public java.lang.String getAtom_id()
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setAtom_id
public void setAtom_id(java.lang.String atom_id)
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getAlt_atom_id
public java.lang.String getAlt_atom_id()
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setAlt_atom_id
public void setAlt_atom_id(java.lang.String alt_atom_id)
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getType_symbol
public java.lang.String getType_symbol()
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setType_symbol
public void setType_symbol(java.lang.String type_symbol)
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getCharge
public java.lang.String getCharge()
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setCharge
public void setCharge(java.lang.String charge)
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getPdbx_align
public java.lang.String getPdbx_align()
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setPdbx_align
public void setPdbx_align(java.lang.String pdbx_align)
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getPdbx_aromatic_flag
public java.lang.String getPdbx_aromatic_flag()
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setPdbx_aromatic_flag
public void setPdbx_aromatic_flag(java.lang.String pdbx_aromatic_flag)
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getPdbx_leaving_atom_flag
public java.lang.String getPdbx_leaving_atom_flag()
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setPdbx_leaving_atom_flag
public void setPdbx_leaving_atom_flag(java.lang.String pdbx_leaving_atom_flag)
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getPdbx_stereo_config
public java.lang.String getPdbx_stereo_config()
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setPdbx_stereo_config
public void setPdbx_stereo_config(java.lang.String pdbx_stereo_config)
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getModel_Cartn_x
public java.lang.String getModel_Cartn_x()
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setModel_Cartn_x
public void setModel_Cartn_x(java.lang.String model_Cartn_x)
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getModel_Cartn_y
public java.lang.String getModel_Cartn_y()
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setModel_Cartn_y
public void setModel_Cartn_y(java.lang.String model_Cartn_y)
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getModel_Cartn_z
public java.lang.String getModel_Cartn_z()
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setModel_Cartn_z
public void setModel_Cartn_z(java.lang.String model_Cartn_z)
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getPdbx_model_Cartn_x_ideal
public java.lang.String getPdbx_model_Cartn_x_ideal()
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setPdbx_model_Cartn_x_ideal
public void setPdbx_model_Cartn_x_ideal(java.lang.String pdbx_model_Cartn_x_ideal)
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getPdbx_model_Cartn_y_ideal
public java.lang.String getPdbx_model_Cartn_y_ideal()
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setPdbx_model_Cartn_y_ideal
public void setPdbx_model_Cartn_y_ideal(java.lang.String pdbx_model_Cartn_y_ideal)
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getPdbx_model_Cartn_z_ideal
public java.lang.String getPdbx_model_Cartn_z_ideal()
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setPdbx_model_Cartn_z_ideal
public void setPdbx_model_Cartn_z_ideal(java.lang.String pdbx_model_Cartn_z_ideal)
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getPdbx_component_comp_id
public java.lang.String getPdbx_component_comp_id()
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setPdbx_component_comp_id
public void setPdbx_component_comp_id(java.lang.String pdbx_component_comp_id)
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getPdbx_residue_numbering
public java.lang.String getPdbx_residue_numbering()
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setPdbx_residue_numbering
public void setPdbx_residue_numbering(java.lang.String pdbx_residue_numbering)
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getPdbx_component_atom_id
public java.lang.String getPdbx_component_atom_id()
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setPdbx_component_atom_id
public void setPdbx_component_atom_id(java.lang.String pdbx_component_atom_id)
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getPdbx_polymer_type
public java.lang.String getPdbx_polymer_type()
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setPdbx_polymer_type
public void setPdbx_polymer_type(java.lang.String pdbx_polymer_type)
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getPdbx_ref_id
public java.lang.String getPdbx_ref_id()
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setPdbx_ref_id
public void setPdbx_ref_id(java.lang.String pdbx_ref_id)
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getPdbx_component_id
public java.lang.String getPdbx_component_id()
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setPdbx_component_id
public void setPdbx_component_id(java.lang.String pdbx_component_id)
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getPdbx_ordinal
public java.lang.String getPdbx_ordinal()
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setPdbx_ordinal
public void setPdbx_ordinal(java.lang.String pdbx_ordinal)
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