Package picard.sam.markduplicates.util
Class ReadEndsForMarkDuplicatesWithBarcodesCodec
- java.lang.Object
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- picard.sam.markduplicates.util.ReadEndsForMarkDuplicatesCodec
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- picard.sam.markduplicates.util.ReadEndsForMarkDuplicatesWithBarcodesCodec
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- All Implemented Interfaces:
htsjdk.samtools.util.SortingCollection.Codec<ReadEndsForMarkDuplicates>
,Cloneable
public class ReadEndsForMarkDuplicatesWithBarcodesCodec extends ReadEndsForMarkDuplicatesCodec
Created by nhomer on 9/13/15.
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Field Summary
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Fields inherited from class picard.sam.markduplicates.util.ReadEndsForMarkDuplicatesCodec
in, out
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Constructor Summary
Constructors Constructor Description ReadEndsForMarkDuplicatesWithBarcodesCodec()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description htsjdk.samtools.util.SortingCollection.Codec<ReadEndsForMarkDuplicates>
clone()
ReadEndsForMarkDuplicates
decode()
void
encode(ReadEndsForMarkDuplicates read)
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Methods inherited from class picard.sam.markduplicates.util.ReadEndsForMarkDuplicatesCodec
getInputStream, getOutputStream, setInputStream, setOutputStream
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Method Detail
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clone
public htsjdk.samtools.util.SortingCollection.Codec<ReadEndsForMarkDuplicates> clone()
- Specified by:
clone
in interfacehtsjdk.samtools.util.SortingCollection.Codec<ReadEndsForMarkDuplicates>
- Overrides:
clone
in classReadEndsForMarkDuplicatesCodec
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encode
public void encode(ReadEndsForMarkDuplicates read)
- Specified by:
encode
in interfacehtsjdk.samtools.util.SortingCollection.Codec<ReadEndsForMarkDuplicates>
- Overrides:
encode
in classReadEndsForMarkDuplicatesCodec
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decode
public ReadEndsForMarkDuplicates decode()
- Specified by:
decode
in interfacehtsjdk.samtools.util.SortingCollection.Codec<ReadEndsForMarkDuplicates>
- Overrides:
decode
in classReadEndsForMarkDuplicatesCodec
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