Package picard.util
Class ScatterIntervalsByNs.ScatterIntervalsByNReferenceArgumentCollection
- java.lang.Object
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- picard.util.ScatterIntervalsByNs.ScatterIntervalsByNReferenceArgumentCollection
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- All Implemented Interfaces:
ReferenceArgumentCollection
- Enclosing class:
- ScatterIntervalsByNs
public static class ScatterIntervalsByNs.ScatterIntervalsByNReferenceArgumentCollection extends Object implements ReferenceArgumentCollection
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Constructor Summary
Constructors Constructor Description ScatterIntervalsByNReferenceArgumentCollection()
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Field Detail
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REFERENCE
@Argument(shortName="R", doc="Reference sequence to use. Note: this tool requires that the reference fasta has both an associated index and a dictionary.") public File REFERENCE
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Method Detail
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getReferenceFile
public File getReferenceFile()
- Specified by:
getReferenceFile
in interfaceReferenceArgumentCollection
- Returns:
- The reference provided by the user, if any, or the default, if any.
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